Rotational dynamics of axially symmetric solutes in isotropic liquids. I. A collective cage description from molecular dynamics simulations

نویسندگان

  • Antonino Polimeno
  • York
  • Giorgio J. Moro
  • Jack H. Freed
چکیده

An operational definition of collective cage variables previously introduced for liquid argon is extended, via a molecular dynamics study, to the rotational properties of axially symmetric molecules. Quantitative measures of the static and dynamic cage properties are extracted for liquid Cl2 near the triple point. The collective cage variables are well described by the potential acting on an arbitrary molecule ~i.e. solute! for a fixed configuration of the other molecules ~i.e. solvent!. A dynamic separability of the solute orientation relative to the cage potential and of the relative solute displacement is justified in part by the faster relaxation found for the latter. Large and persistent orientational cage potentials ~;15–20 kBT) lead to substantial alignment of the solute in the cage with an average local order parameter of 0.87. The reorientational correlation times for the cage are consistent with axially symmetric Brownian motion. The reorientational correlation times for the solute are nearly equal to the equivalent ones of the cage, consistent with the strong coupling of solute within its cage which leads to a collective reorientation of solute and cage ~e.g. tcage (2) 51.4 ps, and tsolute (2) 51.2 ps!. Solute librations within the cage are much faster (t libr (2) 50.12 ps! and are comparable to the relaxation of the relative solute displacements (tr50.15 ps!. The solute angular momentum exhibits the fastest correlation time (t 50.06 ps!. While the orientational cage potential shows rapidly and slowly relaxing components (tv f 50.14 ps and tv s 52.87 ps, respectively!, its dominant portion shows a very long persistence. © 1995 American Institute of Physics.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Rotational dynamics of axially symmetric solutes in isotropic solvents. II. The stochastic model

In paper I of this series, a molecular dynamics ~MD! study of liquid chlorine was performed, and it includes the definition and observation of operational cage variables. These cage variables were used to describe the local environment of a rotating axially symmetric molecule, or probe. Probe and cage properties of interest, such as rotational correlation functions and momentum correlation func...

متن کامل

Nonlinear Dynamics of the Rotational Slender Axially Moving String with Simply Supported Conditions

In this research, dynamic analysis of the rotational slender axially moving string is investigated. String assumed as Euler Bernoulli beam. The axial motion of the string, gyroscopic force and mass eccentricity were considered in the study. Equations of motion are derived using Hamilton’s principle, resulting in two partial differential equations for the transverse motions. The equations are ch...

متن کامل

Rotational dynamics of propane in Na-Y zeolite: a molecular dynamics and quasielastic neutron-scattering study.

We report results from molecular dynamics (MD) simulations and quasielastic neutron-scattering (QENS) measurements on the rotational dynamics of propane in Na-Y zeolite at room temperature with a loading of four molecules per alpha cage. Rotational part of the intermediate scattering function F(Q,t) obtained from the MD simulation suggests that rotational motion is faster relative to the transl...

متن کامل

Energy study at different solvents for potassium Channel Protein by Monte Carlo, Molecular and Langevin Dynamics Simulations

Potassium Channels allow potassium flux and are essential for the generation of electric current acrossexcitable membranes. Potassium Channels are also the targets of various intracellular controlmechanisms; such that the suboptimal regulation of channel function might be related to pathologicalconditions. Realistic studies of ion current in biologic channels present a major challenge for compu...

متن کامل

Planar Molecular Dynamics Simulation of Au Clusters in Pushing Process

Based on the fact the manipulation of fine nanoclusters calls for more precise modeling, the aim of this paper is to conduct an atomistic investigation for interaction analysis of particle-substrate system for pushing and positioning purposes. In the present research, 2D molecular dynamics simulations have been used to investigate such behaviors. Performing the planar simulations can provide a ...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:

دوره   شماره 

صفحات  -

تاریخ انتشار 1995